Summer Research 2026 Poster & Abstract
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Abstract
Colorectal cancer (CRC) is the second leading cause of cancer death within the United States with rates currently on the rise for young adults. The SRY-box transcription factor 9 (SOX9) is a central regulator that promotes CRC by blocking intestinal stem cell differentiation. As a key molecular mediator, observation of tumor response in its total absence is needed to further our understanding. We used the degradation tag (dTAG) system for SOX9-specific protein degradation. In the presence of a small molecule degrader, dTAG V1, SOX9 fusion protein fused with FKBP12 mutant is brought into close molecular proximity to the protein degradation machinery. Our project focuses on the viability of the general dTAG system and other mouse models for the degradation of SOX9. Organoids derived from the colon epithelium of transgenic Sox9-dTAG mice were cultured with or without treatment with dTAG V1, and their SOX9 expression levels were analyzed through Western blot and RT-qPCR. Previous evidence from transgenic mice have demonstrated that complete SOX9 knockout is difficult to achieve by in vivo tamoxifen injections. Preliminary immunofluorescence microscopy and flow cytometry data suggest that it is possible to transduce mouse colon organoids with knockout machinery in vitro followed by selection for a pure population. Whether or not the dTAG system can be more efficient or utilized for other proteins as well as if complete SOX9 knock out will not be malignant in it of itself is to be explored. The dTAG system has advantages in that it is more efficient, effective, and reversible. Using it with SOX9 opens up pathways to more definitive study of the effect of the protein’s loss for CRC therapeutic targeting.